The detailed information of tRNA gene sequence


Sequence ID>WENV170725858
Genome IDLSQX01359100
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1351
End posion on genome 1427
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caattcacac
tRNA gene sequence 
CGCGGGGTAGAGCAGCTAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
tacggtccca
Secondary structure (Cloverleaf model)
>WENV170725858	Met	CAT
                   c      ACCA tacggtccca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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