The detailed information of tRNA gene sequence


Sequence ID>WENV170725881
Genome IDLSQX01359533
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2901
End posion on genome 2813
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccttcgcaaT
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTGAAGGAGGCGGTCTTGAAAACCGTTGAACCTTTGCGGGTT
CCGTGGGTTCGAATCCCACCTCCTCCGNnn
Downstream region at tRNA end position 
ncgcctgcta
Secondary structure (Cloverleaf model)
>WENV170725881	Ser	TGA
                   T      GNnn ncgcctgcta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGAACCTTTGCGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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