The detailed information of tRNA gene sequence


Sequence ID>WENV170725921
Genome IDLSQX01361046
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 47013
End posion on genome 47089
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgttattttg
tRNA gene sequence 
GCGCCAATAGCTCAGTCGGATAGAGCAACGGCCTTCTAAGCCGTGTGCCCGGGGTTCGAA
TCCCTGTTGGCGCGCCA
Downstream region at tRNA end position 
ttattgtggt
Secondary structure (Cloverleaf model)
>WENV170725921	Arg	TCT
                   g      GCCA ttattgtggt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GTGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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