The detailed information of tRNA gene sequence


Sequence ID>WENV170725928
Genome IDLSQX01361148
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3124
End posion on genome 3200
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcaccaaagt
tRNA gene sequence 
CGGGAAGTGGCTCAGCCTGGTAGAGCACAGCGTTCGGGACGCTGGGGTCGGAGGTTCGAA
TCCTCTCTTCCCGACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170725928	Pro	CGG
                   t      ACCA nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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