The detailed information of tRNA gene sequence


Sequence ID>WENV170725985
Genome IDLSQX01363754
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 43191
End posion on genome 43115
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccttccacgt
tRNA gene sequence 
GGGGCCGTGGGTTAGCTTGGCCATACTCGGGCGTTCGGGACGCCTGGACGCCAGTTCAAA
TCTGGCCGGCCCCACCA
Downstream region at tRNA end position 
tcgttcttca
Secondary structure (Cloverleaf model)
>WENV170725985	Pro	CGG
                   t      ACCA tcgttcttca
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G G T C     A
    T C G A        G      | | | | |     A
  T         T T G G       G C C A G     C
  G           | | +                 T T
  G         T A C T
    C C A          C     GGAC
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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