The detailed information of tRNA gene sequence


Sequence ID>WENV170725986
Genome IDLSQX01363785
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 33054
End posion on genome 32965
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttttatcc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGCCTATGGTGACGGTCTTGAAAACCGTTGTCCTCGCAAGAGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV170725986	Ser	TGA
                   c      GCCA ttttattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    C       T G G T
      C T A        G     TGTCCTCGCAAGAGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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