The detailed information of tRNA gene sequence


Sequence ID>WENV170726006
Genome IDLSQX01364444
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1899
End posion on genome 1990
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgcgcagt
tRNA gene sequence 
GGAGAGTTGTCCGAGTTGGTCTAAGGAGCACGACTGGAAATCGTGTAACGGTCTAAAGCC
GTTCGAGAGTTCGAATCTCTTGCTCTCCGCCA
Downstream region at tRNA end position 
aaaagcccat
Secondary structure (Cloverleaf model)
>WENV170726006	Ser	GGA
                   t      GCCA aaaagcccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T A
                    T     T T C T C     A
    T T G A        G      + | | | |     G
  G         G C C T       G A G A G     C
  G           | | |                 T T
  T         A G G A
    C T A          G     TAACGGTCTAAAGCCGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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