The detailed information of tRNA gene sequence


Sequence ID>WENV170726082
Genome IDLSQX01367262
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6261
End posion on genome 6336
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttgacggttg
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCGCGGCGTTCGCAACGCCGAGGCCAGGGGTTCGATC
CCCCTCATCTCCACCA
Downstream region at tRNA end position 
ggcgttattc
Secondary structure (Cloverleaf model)
>WENV170726082	Ala	CGC
                   g      ACCA ggcgttattc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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