The detailed information of tRNA gene sequence


Sequence ID>WENV170726101
Genome IDLSQX01367712
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 78
End posion on genome 3
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgccaccagt
tRNA gene sequence 
GCCCATGTAGCTCAGTAGGTAGAGCGTCGCCTTGGTAAGGCGGAGGTCACCGGTTCAATC
CCGGTCATGGGCTCCA
Downstream region at tRNA end position 
ttnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170726101	Thr	GGT
                   t      TCCA ttnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     T G G C C     A
      T G A        A      | | | | |     A
    A       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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