The detailed information of tRNA gene sequence


Sequence ID>WENV170726123
Genome IDLSQX01368545
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 136652
End posion on genome 136728
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttgatcaggt
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
tttcgagggc
Secondary structure (Cloverleaf model)
>WENV170726123	Asp	GTC
                   t      GCCA tttcgagggc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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