The detailed information of tRNA gene sequence


Sequence ID>WENV170726148
Genome IDLSQX01369038
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 11089
End posion on genome 11165
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttagcaagt
tRNA gene sequence 
CGGGGCATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCGAA
TCCTACTGTCCCGACCA
Downstream region at tRNA end position 
ctatctctca
Secondary structure (Cloverleaf model)
>WENV170726148	Pro	TGG
                   t      ACCA ctatctctca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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