The detailed information of tRNA gene sequence


Sequence ID>WENV170726233
Genome IDLSQX01371969
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 93225
End posion on genome 93151
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aatcgattat
tRNA gene sequence 
GGCCCTATCGTCTAGCGGTTAGGACACCAGGTTCTCATCCTGGCAACCCGGGTTCGATTC
CCGGTAGGGTCACCA
Downstream region at tRNA end position 
caagagactt
Secondary structure (Cloverleaf model)
>WENV170726233	Glu	CTC
                   t      ACCA caagagactt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T T
                    T     G G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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