The detailed information of tRNA gene sequence


Sequence ID>WENV170726356
Genome IDLSQX01376691
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1251
End posion on genome 1175
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
actctcggtc
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGCGACGGTTTTGGGTACCGTAGGCCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
gtccagacgg
Secondary structure (Cloverleaf model)
>WENV170726356	Pro	TGG
                   c      ACCA gtccagacgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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