The detailed information of tRNA gene sequence


Sequence ID>WENV170726381
Genome IDLSQX01377848
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1295
End posion on genome 1220
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caccaagaac
tRNA gene sequence 
GCTGGTGTAGCTCAGCTGGTAGAGCAGCTGATTTGTAATCAGCAGGTCGGGGGTTCGATT
CCGTCCACCAGCTCCA
Downstream region at tRNA end position 
aaaataaaaa
Secondary structure (Cloverleaf model)
>WENV170726381	Thr	TGT
                   c      TCCA aaaataaaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C T G C C     A
      C G A        A      | +   | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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