The detailed information of tRNA gene sequence


Sequence ID>WENV170726394
Genome IDLSQX01378348
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 115433
End posion on genome 115525
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttatgtttt
tRNA gene sequence 
GGAGGAGTACCCAAGTGGCTGAAGGGGACGGTTTGCTAAATCGTTAGTACGGGGAAACCT
GTAGCGGGAGTTCGAATCTCCCCTCCTCCGCCA
Downstream region at tRNA end position 
aatataattg
Secondary structure (Cloverleaf model)
>WENV170726394	Ser	GCT
                   t      GCCA aatataattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G G G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGTACGGGGAAACCTGTAGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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