The detailed information of tRNA gene sequence


Sequence ID>WENV170726437
Genome IDLSQX01380225
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9417
End posion on genome 9493
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cttcggaaaa
tRNA gene sequence 
GCCTCTTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGATCGCTGGTTCAAG
TCCAGCAGGGGGAGCAA
Downstream region at tRNA end position 
atcaaagagg
Secondary structure (Cloverleaf model)
>WENV170726437	Asn	GTT
                   a      GCAA atcaaagagg
                     G   A
                     C - G
                     C - G
                     T + G
                     C - G
                     T + G
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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