The detailed information of tRNA gene sequence


Sequence ID>WENV170726439
Genome IDLSQX01380247
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9865
End posion on genome 9784
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cagatagcac
tRNA gene sequence 
GGGGAGGTTCCCGAGTGGTCAAAGGGGGCAGACTGTAAATCTGTTGGCTCAGCCTTCGAA
GGTTCAAATCCTTCTCTCCCCAtct
Downstream region at tRNA end position 
atgcatgcct
Secondary structure (Cloverleaf model)
>WENV170726439	Tyr	GTA
                   c      Atct atgcatgcct
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T T C C     A
      T G A        T      | | | | |     A
    G       G C C C       G A A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        G     TGGCTCAGCCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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