The detailed information of tRNA gene sequence


Sequence ID>WENV170726441
Genome IDLSQX01380396
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5607
End posion on genome 5684
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tattgtactt
tRNA gene sequence 
CGGGGTGTAGCACAGTCCGGTTAGTGTACCTGGTTTGGGACCAGGGGGTCGCGAGTTCGA
ATCCCGCCACCCCGACGA
Downstream region at tRNA end position 
aatacagttc
Secondary structure (Cloverleaf model)
>WENV170726441	Pro	TGG
                   t      ACGA aatacagttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
    C T G A        A      | | |   |     G
  C         C A C G       G C G A G     C
  G         | | | +                 T T
  G         G T G T
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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