The detailed information of tRNA gene sequence


Sequence ID>WENV170726515
Genome IDLSQX01383709
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5787
End posion on genome 5710
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctccgcacgc
tRNA gene sequence 
AGGTCTGTAGCTCGAACTGGTTAGAGCACCGCACTCCAAATGCGGGGGTTGAGGGTTCGA
ATCCTTCCAGGCCTGCCA
Downstream region at tRNA end position 
ttttgttttt
Secondary structure (Cloverleaf model)
>WENV170726515	Trp	CCA
                   c      GCCA ttttgttttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T T C C     A
    C A A G        A      | | + | |     G
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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