The detailed information of tRNA gene sequence


Sequence ID>WENV170726544
Genome IDLSQX01385104
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9381
End posion on genome 9457
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtacgtataa
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTTAGAGCTTCCGGCTCATAACCGGGTGGTCGGTGGTTCGAA
TCCACCCGAGCCCACCA
Downstream region at tRNA end position 
ataaaagccg
Secondary structure (Cloverleaf model)
>WENV170726544	Met	CAT
                   a      ACCA ataaaagccg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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