The detailed information of tRNA gene sequence


Sequence ID>WENV170726563
Genome IDLSQX01385940
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 89
End posion on genome 15
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ataaacttgt
tRNA gene sequence 
GGCGCGGTGGCGAAGTGGAAACGCTGGGGTCTGCAAAACCTCGATGCGAGGGTTCGATTC
CCTCCCGCGCCTCAA
Downstream region at tRNA end position 
gaagaaaata
Secondary structure (Cloverleaf model)
>WENV170726563	Cys	GCA
                   t      TCAA gaagaaaata
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     C T C C C     A
        G A        G      | | | | |     G
      T     A G C G       G A G G G     C
      G       | | |                 T T
      G     A C G C
        A A        T     GATGC
                    G - C
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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