The detailed information of tRNA gene sequence


Sequence ID>WENV170726605
Genome IDLSQX01387557
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1955
End posion on genome 1879
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
tctagaaggt
tRNA gene sequence 
GCGCCGGTAGCTCAACTGGATAGAGCATCGGACTACGGATCCGAAGGTTGGGGGTTCAAG
TCCTCTCCGGCGCGCCA
Downstream region at tRNA end position 
tgatttaaaa
Secondary structure (Cloverleaf model)
>WENV170726605	Arg	ACG
                   t      GCCA tgatttaaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T C T C C     A
      C A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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