The detailed information of tRNA gene sequence


Sequence ID>WENV170726607
Genome IDLSQX01387610
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15651
End posion on genome 15726
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaagcaatat
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCGGCGGTCTCCAAAACCGTAGGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
tcaaaaaagg
Secondary structure (Cloverleaf model)
>WENV170726607	Trp	CCA
                   t      GCCA tcaaaaaagg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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