The detailed information of tRNA gene sequence


Sequence ID>WENV170726624
Genome IDLSQX01387769
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1268
End posion on genome 1193
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattgacgc
tRNA gene sequence 
CGCGGGGTAGAGCAGCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCAGGGGTTCAAAT
CCCCTCCCCGCAACCA
Downstream region at tRNA end position 
aaaaaatctc
Secondary structure (Cloverleaf model)
>WENV170726624	Met	CAT
                   c      ACCA aaaaaatctc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       C G A G       A G G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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