The detailed information of tRNA gene sequence


Sequence ID>WENV170726661
Genome IDLSQX01389012
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1578
End posion on genome 1502
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttttattgtt
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGCTAGAGCTTCTGCCTTCCAAGCAGACTGTCGCGAGTTCGAG
TCTCGTCTCCCGCTCCA
Downstream region at tRNA end position 
cttttaaaat
Secondary structure (Cloverleaf model)
>WENV170726661	Gly	TCC
                   t      TCCA cttttaaaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        T     CTGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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