The detailed information of tRNA gene sequence


Sequence ID>WENV170726731
Genome IDLSQX01392141
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2956
End posion on genome 3032
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cactgtatct
tRNA gene sequence 
GCGCCAGTAGCTCAGTTGGATAGAGTGTTTGACTACGAATCAAAAGGTCGGGGGTTCGAA
TCCCTCCTGGCGTACCA
Downstream region at tRNA end position 
gtttcgctat
Secondary structure (Cloverleaf model)
>WENV170726731	Arg	ACG
                   t      ACCA gtttcgctat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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