The detailed information of tRNA gene sequence


Sequence ID>WENV170726823
Genome IDLSQX01395437
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 174
End posion on genome 98
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaatggcctt
tRNA gene sequence 
GGTTCGGTAGTTCAGTTGGTTAGAACGCCAGCCTGTCACGCTGGAGGTCGTGGGTTCGAG
CCCCATCCAGATCGCCA
Downstream region at tRNA end position 
aggtgcccta
Secondary structure (Cloverleaf model)
>WENV170726823	Asp	GTC
                   t      GCCA aggtgcccta
                     G - C
                     G + T
                     T - A
                     T + G
                     C   A
                     G - C
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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