The detailed information of tRNA gene sequence


Sequence ID>WENV170726830
Genome IDLSQX01395585
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1648
End posion on genome 1723
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cactttgtgt
tRNA gene sequence 
GGGGATGTAGCTCAGCTGGGAGAGCGCGGCGTTCGCAACGCCGAGGCCAGGGGTTCGATC
CCCCTCATCTCCACCA
Downstream region at tRNA end position 
catggcttca
Secondary structure (Cloverleaf model)
>WENV170726830	Ala	CGC
                   t      ACCA catggcttca
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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