The detailed information of tRNA gene sequence


Sequence ID>WENV170726846
Genome IDLSQX01396093
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 23953
End posion on genome 23877
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ccgcggatgt
tRNA gene sequence 
GTGTCCGTAGCTCAGCTGGATAGAGCGTCGGCCTCCGGAGCCGAAGGTCTCGGGTTCAAA
TCCCGACGGGCACGCCA
Downstream region at tRNA end position 
aatttcttcg
Secondary structure (Cloverleaf model)
>WENV170726846	Arg	CCG
                   t      GCCA aatttcttcg
                     G - C
                     T - A
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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