The detailed information of tRNA gene sequence


Sequence ID>WENV170726848
Genome IDLSQX01396096
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 886
End posion on genome 960
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctaccaaact
tRNA gene sequence 
GGCCCCATGGTCTAGTGGTTAGGACACGGCCCTTTCAAGGCTGAGGTAGGGGTTCGATTC
CCCTTGGGGCTACCA
Downstream region at tRNA end position 
aaggcggtaa
Secondary structure (Cloverleaf model)
>WENV170726848	Glu	TTC
                   t      ACCA aaggcggtaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AGGT
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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