The detailed information of tRNA gene sequence


Sequence ID>WENV170726900
Genome IDLSQX01398148
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3669
End posion on genome 3594
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agatagatat
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCAATGGTCTCCAAAACCATGTGCCGAGGGTTCAAAT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
tatttttatg
Secondary structure (Cloverleaf model)
>WENV170726900	Trp	CCA
                   t      GCCA tatttttatg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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