The detailed information of tRNA gene sequence


Sequence ID>WENV170726942
Genome IDLSQX01399530
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5079
End posion on genome 5155
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atgccgatac
tRNA gene sequence 
GGGTGATTAGCTCAGCTGGTTAGAGTACCACGTTGACATCGTGGGGGTCGATGGTTCGAG
TCCATTATCACCCACCA
Downstream region at tRNA end position 
gaaaaaagag
Secondary structure (Cloverleaf model)
>WENV170726942	Val	GAC
                   c      ACCA gaaaaaagag
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     T T A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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