The detailed information of tRNA gene sequence


Sequence ID>WENV170727099
Genome IDLSQX01404838
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 8996
End posion on genome 9072
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cgaacttgtt
tRNA gene sequence 
GGGCCTGTAGCTCAGTAGGATAGAGCGACGGCCTCCTAAGCCGTAGGTCGCCGGTTCGAG
TCCGGCCAGGCCCGCCA
Downstream region at tRNA end position 
ttttaagaag
Secondary structure (Cloverleaf model)
>WENV170727099	Arg	CCT
                   t      GCCA ttttaagaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | | | |     G
    A       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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