The detailed information of tRNA gene sequence


Sequence ID>WENV170727102
Genome IDLSQX01404909
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 35
End posion on genome 109
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaataattgc
tRNA gene sequence 
TCCTCGGTAGCTCAATGGTAGAGCACCCGGCTGTTAACCGGGTGGTTGCAGGTTCGAGTC
CTGCCCGGGGAGCCA
Downstream region at tRNA end position 
ttttttattg
Secondary structure (Cloverleaf model)
>WENV170727102	Asn	GTT
                   c      GCCA ttttttattg
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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