The detailed information of tRNA gene sequence


Sequence ID>WENV170727108
Genome IDLSQX01404991
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 16629
End posion on genome 16556
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cattttttta
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCGGTTCGAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV170727108	Cys	GCA
                   a      TCCA ttttttttgc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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