The detailed information of tRNA gene sequence


Sequence ID>WENV170727128
Genome IDLSQX01405805
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 5740
End posion on genome 5814
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtatcagtga
tRNA gene sequence 
GGGGTCGTAGGGTAGCCTGGACCATCCTATGGCGTTCGGGACGCTGTAACCTGAGTTCAA
ATCTCAGCGACCCCAttt
Downstream region at tRNA end position 
tattattaaa
Secondary structure (Cloverleaf model)
>WENV170727128	Pro	CGG
                   a      Attt tattattaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C T G A G     C
  G           | | +                 T T
  G         T C C T
    A C C A        A     TAAC
                    T + G
                    G + T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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