The detailed information of tRNA gene sequence


Sequence ID>WENV170727136
Genome IDLSQX01405957
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 17215
End posion on genome 17140
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtcgtattat
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCATAGGTTCGATC
CCTATTGTTCCCACCA
Downstream region at tRNA end position 
ttatacggcc
Secondary structure (Cloverleaf model)
>WENV170727136	Val	TAC
                   t      ACCA ttatacggcc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          C T
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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