The detailed information of tRNA gene sequence


Sequence ID>WENV170727139
Genome IDLSQX01405957
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 16951
End posion on genome 16876
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtcgtattat
tRNA gene sequence 
GGGAGCATAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCATAGGTTCGATC
CCTATTGTTCCCACCA
Downstream region at tRNA end position 
tatacggccc
Secondary structure (Cloverleaf model)
>WENV170727139	Val	TAC
                   t      ACCA tatacggccc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     A - T          C T
                    T     T A T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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