The detailed information of tRNA gene sequence


Sequence ID>WENV170727180
Genome IDLSQX01407382
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 13588
End posion on genome 13512
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccagcgccac
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCACTGGTTCGAC
TCCAGTCACGCCCACCA
Downstream region at tRNA end position 
accctctcga
Secondary structure (Cloverleaf model)
>WENV170727180	Ile	GAT
                   c      ACCA accctctcga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T C
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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