The detailed information of tRNA gene sequence


Sequence ID>WENV170727201
Genome IDLSQX01408421
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4049
End posion on genome 4126
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
agttcattgt
tRNA gene sequence 
GGGCGCGTGGCCTAGCCCGGATATGGCGGCAGCCTCCTAAGCTGTAAATCGGGGGTTCAA
ATCCCTTCGCGCCCGCTA
Downstream region at tRNA end position 
aaacccatct
Secondary structure (Cloverleaf model)
>WENV170727201	Arg	CCT
                   t      GCTA aaacccatct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        G      + + | | |     A
  C         T C C G       G G G G G     C
  G           | | |                 T T
  G         T G G C
    A T A          G     AAATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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