The detailed information of tRNA gene sequence


Sequence ID>WENV170744516
Genome IDLULX01002443
Search identical group
Phylum/Class[LULX] marine metagenome; Red Sea water column Station 91 - depth 500m
Species
Start position on genome 2909
End posion on genome 2824
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actgattttT
tRNA gene sequence 
GCAGAGGTCGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGTtt
Downstream region at tRNA end position 
attattttcc
Secondary structure (Cloverleaf model)
>WENV170744516	Ser	TGA
                   T      GTtt attattttcc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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