The detailed information of tRNA gene sequence


Sequence ID>WENV170747885
Genome IDLUMD01001332
Search identical group
Phylum/Class[LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m
Species
Start position on genome 2277
End posion on genome 2354
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttattagtac
tRNA gene sequence 
GGAGTGGTAGTTCAGTTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
GTCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
tttaattgtt
Secondary structure (Cloverleaf model)
>WENV170747885	Asp	GTC
                   c      GCCA tttaattgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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