The detailed information of tRNA gene sequence


Sequence ID>WENV170748714
Genome IDLUME01001078
Search identical group
Phylum/Class[LUME] marine metagenome; Red Sea water column Station 34 - depth 200m
Species
Start position on genome 2669
End posion on genome 2585
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacaaacat
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATTCCATGTTCGCAAGGACACG
GGGGTTCAAATCCCCCTCCCCGCGCtt
Downstream region at tRNA end position 
ttttaattaa
Secondary structure (Cloverleaf model)
>WENV170748714	Ser	GCT
                   t      GCtt ttttaattaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGGACAC
                    T - A
                    G - C
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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