The detailed information of tRNA gene sequence


Sequence ID>WENV170749561
Genome IDLUMF01001299
Search identical group
Phylum/Class[LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m
Species
Start position on genome 4090
End posion on genome 4004
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcgtttagt
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
GGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
ctctttaatt
Secondary structure (Cloverleaf model)
>WENV170749561	Ser	GCT
                   t      GCCA ctctttaatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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