The detailed information of tRNA gene sequence


Sequence ID>WENV170762829
Genome IDLWDU01000032
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5249
End posion on genome 5324
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cattttagag
tRNA gene sequence 
ACGGGTTTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCAACCCGTGCAA
Downstream region at tRNA end position 
aagttagaat
Secondary structure (Cloverleaf model)
>WENV170762829	Trp	CCA
                   g      GCAA aagttagaat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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