The detailed information of tRNA gene sequence


Sequence ID>WENV170763298
Genome IDLWDU01006242
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2044
End posion on genome 2134
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacagtttac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTAAGCGTTAATAGCGT
TTCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
tacaagattg
Secondary structure (Cloverleaf model)
>WENV170763298	Ser	GGA
                   c      GCCA tacaagattg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TAAGCGTTAATAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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