The detailed information of tRNA gene sequence


Sequence ID>WENV170763955
Genome IDLWDU01025651
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 180
End posion on genome 104
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgtgccttg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGCGGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
agctcggcgt
Secondary structure (Cloverleaf model)
>WENV170763955	Met	CAT
                   g      ACCA agctcggcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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