The detailed information of tRNA gene sequence


Sequence ID>WENV170766564
Genome IDLWDU01042046
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 107
End posion on genome 182
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagtcagtat
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttggcaagc
Secondary structure (Cloverleaf model)
>WENV170766564	Trp	CCA
                   t      GCCA tttggcaagc
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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