The detailed information of tRNA gene sequence


Sequence ID>WENV170779191
Genome IDLZQN01000005
Search identical group
Phylum/Class[LZQN] oil field metagenome; sample BH-FW-7 from oil reservoir
Species
Start position on genome 105690
End posion on genome 105601
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taatctttaa
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGAAGGCGGCGGTCTTGAAAACCGCAGACCCTTGACGGGGT
CCGGGAGTTCGAATCTCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ctaaaaacca
Secondary structure (Cloverleaf model)
>WENV170779191	Ser	TGA
                   a      GCCA ctaaaaacca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G A G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     AGACCCTTGACGGGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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