The detailed information of tRNA gene sequence


Sequence ID>WENV170780437
Genome IDMAAB01001211
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 62330
End posion on genome 62245
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attatccgat
tRNA gene sequence 
GCCCGGGTGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGCTCTTAGAGTGTGA
CGGTTCAAGTCCGTCTCCGGGTACCA
Downstream region at tRNA end position 
cttttttatt
Secondary structure (Cloverleaf model)
>WENV170780437	Leu	TAA
                   t      ACCA cttttttatt
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     C T G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G A C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTCTTAGAGTGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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